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Best Non Toxic Toilet Bowl Cleaner: Top 5 Safe Picks in 2024

best toilet bowl cleaners

Last Updated on October 18, 2023

Many toilet bowl cleaners contain harsh chemicals that can have nasty smells and cause skin irritation upon contact. They can cause respiratory problems if ingested. These toxic cleaners can also corrode your pipes and septic systems. 

Although they can remove dirt, grime, and hard water stains, they cannot maintain a healthy environment. A non-toxic toilet bowl cleaner is a safe and effective alternative specially formulated for sensitive skin.

Using the best non toxic toilet bowl cleaner will remove scale and other deposits without harming the plumbing system. They leave a fresh and pleasant scent in your bathroom. Here we share some top non toxic toilet cleaners that are safe for you, your family, and the environment.

Best Non Toxic Toilet Bowl Cleaner: Top 3 Recommendations

Better Life Non-Toxic Natural Toilet Bowl Cleaner

Item Form: Gel
Scent: Peppermint
Quantity: 48 Fl Oz

Nature Clean Non-Toxic Cleaner for Toilet Bowl

Item Form: Strips
Scent: Fresh Lime
Quantity: 36 Strips

Biokleen Plant-based Toilet Bowl Cleaner

Item Form: Spray
Scent: Fresh Lavender
Quantity: 64 Fl Oz (2 Pack)

Is Non-Toxic Toilet Bowl Cleaner Corrosive?

Best eco friendly toilet cleaner

Non-toxic toilet bowl cleaners are not corrosive and quite gentle on surfaces. These toilet bowl cleaning agents are made with natural ingredients like white vinegar and baking soda, both mild acids. 

When these ingredients are combined, they create an effective cleaning solution. It removes dirt and grime without damaging the surface of the toilet bowl.

Can Non-Toxic Toilet Bowl Cleaner Remove Bacteria in the Toilet?

Non-toxic cleaners typically use different ingredients, such as vinegar or hydrogen peroxide. These ingredients are also effective at killing bacteria and viruses, but they may not be as strong as chlorine bleach. So they may not kill all bacteria and viruses.

Is Non-Toxic Toilet Bowl Cleaner Safe for Septic Systems?

best cleaning product for toilet bowls

Yes, non-toxic cleaners are safe for pipes and septic systems. They can help maintain your septic system by preventing the build-up of harmful bacteria. 

If you have a septic system, be careful about what you put down your drains. Toxic toilet bowl cleaners can damage your toilet bowl cleaning system and contaminate groundwater.

Top 5 Natural Toilet Bowl Cleaners: Explained

best best natural toilet tank cleaner

When cleaning the toilet, you want to ensure you are using a product that will be effective. A clean toilet is a sign of a healthy home. The following are five of the best non-toxic toilet bowl cleaners available.

1) Better Life Non-Toxic Natural Toilet Bowl Cleaner

This gel toilet bowl cleaner by Better Life is usually preferred as they adhere to the bowl and clean it better. It is peppermint scented to leave a refreshing peppermint smell after every use. Peppermint is also known to be a great deodorizer. 

It is powerful enough to remove all the tough stains and residue from the bowl with just one brush. This bathroom cleaner is safe for septic systems making it a worry-free product. It is also convenient for users to have a 48 fl ounce pack size.

Better Life Natural Toilet Bowl Cleaner, Tea Tree & Peppermint Scent

● Gel form
● Peppermint Scent
● Smelling Fresh
● 48 Fluid Ounces
● Plant-Based

How Can This Product Help You?

The Better Life non-toxic natural toilet bowl cleaner is made with a tea tree and peppermint combo that gives it a refreshing scent. As it is an organic product, it is also good for the environment. It removes grime, and hard water buildup.

It is better than some chemical cleaners because it is gentle on the porcelain and leaves no residue. The bathroom cleaner contains ingredients that help to keep your toilet shiny and clean.

You can use toilet bowl cleaner without worrying about septic tanks. This product works well in RV holding tanks. You can clean the toilet without causing migraines, making it one of the best natural toilet bowl cleaners available.

Positive Things:

  • Smells good and clean
  • Keeps toilet shiny and clean
  • Suitable for rv holding tank
  • Removes hard water yellow lines
  • Cleans the toilet without headaches

Negative Things:

  • Smells overwhelming to sensitive noses
  • May need to apply twice for hard stains

2) Nature Clean Non-Toxic Cleaner for Toilet Bowl

Nature Clean brand brings a new non-toxic cleaner for toilet bowls that is a safe alternative to traditional cleaners. The product comes in the form of strips that are placed in the toilet bowl and allowed to dissolve.

Made from biodegradable plastic free of bleach and chlorine and are septic safe. These strips are non-corrosive and don’t leave any marks. Since it is non-splash, there’s no need to worry about getting cleaner on your hands or clothes. The fresh lime scent is also a nice touch.

Nature Clean Non-Toxic Plastic Free Toilet Bowl Cleaner Strips 36 count

● Strips form
● Fresh lime scent
● 36 Strips
● Plastic-Free biodegradable

Why You May Consider Using This Product:

If you’re looking for an easy and safe way to clean your toilet, Nature Clean’s non-toxic cleaner for toilet bowls is a good choice. This concentrated cleaner comes in a simple and easy-to-use strip form.

It is made without any harsh chemicals or bleach. This makes it a safe choice for use around pets and children and also reduces the amount of plastic waste produced. 

Using this natural bathroom cleaner, you will be able to clean the toilet very well. It removes bacteria and mineral build-up with ease. The product is easy to use and works great in 2 lesser used bathrooms.

It removes even the toughest stains and eliminates any bad odors. You can use it at the home, office, student dorm, RV, lake house, and other places that require a clean toilet.

Positive Things:

  • Clean very well and easy to use
  • Safe around pets and children
  • Effective at removing tough stains
  • Removes mineral build-up and bacteria
  • Suitable for 2 less-used bathrooms

Negative Things:

  • No fresh scent when cleaning a bitter, nasty toilet

3) Naturally it’s clean Natural Enzyme Cleaner for Toilet Bowl

Naturally it’s clean brand comes with an enzyme cleaner that is safe for septic systems. This enzyme cleaner is plant based and will not cause any harm to your children or pets. 

It is also effective at removing hard water buildup and any unpleasant odors. This cleaner is non-caustic and comes in a fresh scent. There are 48 fluid ounces in 2 bottles in total.

Biokleen Bac-Out Natural Bathroom Cleaner

● Liquid Form
● Fresh scent
● Non-caustic
● 48 Fluid Ounces

Why Should You Consider This Product?

Naturally it’s clean natural enzyme cleaner for toilet bowls is a powerful and effective cleaning agent. It is designed to clean stubborn toilet bowl stains and remove hard water buildup. 

This cleaning product has a pleasant, light scent that doesn’t overpower the senses. It is suitable for use on all types of toilet surfaces, including urinals, bidets, fiberglass, porcelain, and more.

You can clean any toilet, including TOTO and toddler toilets, with this cleaner. This natural enzyme cleaner gently removes dirt from toilet bowls, leaving them looking clean and fresh with no risk to your family’s health.

Positive Things:

  • Doesn’t have overpowering odors
  • Bathroom looks clean
  • Suitable for use in TOTO toilets
  • Can be used in Toddler toilets
  • Works quite well with hard water

Negative Things:

  • Very liquified pink water

4) Biokleen Plant-based Toilet Bowl Cleaner

The toilet bowl cleaner by Biokleen cleans your bathroom with a natural lavender scent. Its professional-strength enzymes are eco-friendly and biodegradable, making them a safe choice for your home.

Using this cleaner, you can remove buildup and stains while deodorizing stinky odors. This product leaves your bathroom smelling fresh and clean. Its 64-ounce bottle is large enough to last through multiple uses.

Naturally It’s Clean Toilet Cleaner, Cleans Toilet Bowls, Bidets, Urinal Surfaces, Porcelain, Fiberglass and Hardwater Buildup

● Fresh lavender scent
● 64.0 Fl Oz
● No artificial fragrance
● Enzyme professional strength
● Plant-based

Why Might You Find It Useful?

Biokleen plant-based toilet bowl cleaner provides a safe and eco-friendly way to clean your toilet. The product disinfects and deodorizes surfaces without the use of harsh chemicals. It is also non-toxic, so you can feel good about using it without harming the planet.

Due to its low scent, it is ideal for those sensitive to strong smells. The ingredients are safe on all surfaces, including toilets, sinks, showers, and floors.

You can use it on the wall, the floor, the sink, the bathtub, and the kitchen. It cleans carpets well and removes stains as well. Children and pets are safe around it.

Positive Things:

  • Smells fresh without being overwhelming
  • Disinfects and deodorizes surfaces
  • Non-toxic and biodegradable
  • Suitable for all surfaces
  • Brightens up the bathroom
  • Removes carpet stains effectively

Negative Things:

  • No mention of bacteria-killing agents
  • Less effective for removing soap scum

5) Sonett Essential Oil Toilet Bowl Cleaner

All-natural toilet bowl cleaner from Sonett is highly effective. It combines natural ingredients and a cedar-citronella scent to get rid of dirt and grime in your bathroom.

With its skin-friendly formula, even the most sensitive skin will be able to use this spray. Every use leaves your bathroom sparkling and fresh, whether it’s a toilet, sink, or shower.

What Makes It Useful?

Sonett essential oil toilet bowl cleaner is a high-quality, biodegradable product free of petrochemical ingredients. This is a great choice if you want a mild, pleasant cleaning product with a mild, pleasant scent, this is a great choice. 

It effectively removes icky build-up from your toilet bowl, leaving it clean and sanitary. This all natural toilet bowl cleaner can remove tough stains and scale from your toilet bowl. 

As it is formulated from natural ingredients, it is ecologically conscious and free of harmful preservatives, enzymes, and GMOs. The surfaces will appear clean and coated after using this powerful cleaning solution.

Positive Things:

  • Very natural refreshing scent
  • The surfaces look like they’re coated
  • Removes scale and stubborn stains
  • Removes ickiness from toilet bowls

Negative Things:

  • The cleaning scale requires continued treatment

We have ended our list of the best non bleach toilet cleaners. These are all excellent choices for those looking for an environmentally friendly and healthy bathroom.

Comparison Chart of the Toilet Cleaner for Smell:

Product NameItem FormScent

Better Life Natural Toilet Bowl CleanerGelPeppermint48 Fl Oz
Nature Clean Non-Toxic Cleaner for Toilet BowlStripsFresh Lime36 Strips
Biokleen Plant Based Toilet Bowl CleanerSprayFresh Lavender64 Fl Oz (2 Pack)
Naturally it’s clean Natural Enzyme Cleaner for Toilet BowlLiquidFresh48 Fl Oz (2 Pack)
Sonett Essential Oil Toilet Bowl CleanerSprayCedar-Citronella25 Fl Oz

Buying Guide on the Best Green Toilet Bowl Cleaner

Buying Guide on the Best Green Toilet Bowl Cleaner

Many homeowners are now looking for environmentally friendly alternatives to conventional toilet bowl cleaners. They reduce their environmental impact greatly. When shopping for a green toilet bowl cleaner, remember a few things:

Ingredients List:

Natural toilet bowl cleaners typically rely on plant-based ingredients like corn and coconut to get the job done. These ingredients are effective at breaking down dirt and grime without causing harm to you or the environment.

A natural cleaner often contains purified water, which helps rinse the residue away. Some also contain lactic acid or citric acid, which can help to remove tough stains. Tea tree, leaf, peppermint, lime, and lemongrass essential oils are also common ingredients.

Many traditional cleaners rely on harsh chemicals like chlorine bleach, phosphates, and sulfates to do the job. You should need natural bathroom cleaners with no artificial colors or harsh fumes. It is best to avoid toilet bowl cleaners containing petroleum and vapors.

Item Form:

Eco toilet cleaners come in various forms, including gel, strips, liquid, and spray. Let’s discuss each form:

Gel Type:

This type of cleaner is made from natural ingredients, such as essential oils and plant-based surfactants. It is also biodegradable and safe for septic systems.

To use gel-type natural toilet bowl cleaner, squirt a small amount into the bowl and wait for it to coat the bowl. After that, scrub the bowl with a brush and flush it.

Strips Type:

These are made with natural ingredients that are safe for septic systems and the environment. They are also biodegradable. Drop 1 strip into the toilet bowl and let it dissolve. The strip will slowly release cleaner as it dissolves. After about 20 seconds, brush the bowl and flush.

Liquid Type:

This is the most common type of natural toilet bowl cleaner. It is easy to use – shake and stream the liquid around the bowl. Soak for a few minutes, brush and flush the toilet.

Spray Type:

Another easy-to-use option. It has a bioactive formula and is safe for septic systems. Spray around the bowl and let it sit for 1-2 minutes for light cleaning or 5 minutes for heavy cleaning. Wipe it with a damp cloth thoroughly. You don’t need to rinse or brush after using this type of cleaner.


You shouldn’t have to sacrifice your sense of smell to clean the bathroom. The eco toilet cleaner comes in four different scents: peppermint, fresh lime, fresh lavender, and cedar-citronella. The scents are all natural, so you’re not exposed to synthetic chemicals.

Each scent has its own unique benefits. Peppermint is refreshing and invigorating, while fresh lime is bright and cheerful. Fresh lavender is calming and relaxing, and cedar-citronella is perfect for those who want a little bit of spice in their life.


The quantity of all-natural toilet cleaner available commercially can vary considerably. Some brands only offer 48 fluid ounces, while others offer 64.0 fluid ounces. The number of strips also varies widely.

Different brands offer different types of containers, including plastic bottles and glass bottles. The quantity also depends on the price of the toilet bowl cleaners.

Scent Intensity:

The scents of green toilet cleaners range from very light to very strong. Some brands offer only a light scent, while others offer a strong scent. A light scent toilet cleaner is perfect for those sensitive to smells.

If you want a powerful cleaning experience, choose a toilet cleaner with a strong scent. It can cause headaches and nausea in some people.

Strong or Weak Cleaners:

Toilet cleaners can be divided into two broad categories: those designed to remove dirt and grime and those designed to remove stubborn stains.

Most toilet cleaners will do an adequate job when removing dirt and grime, and other deposits. You’ll need a stronger cleaner if you’re dealing with stubborn stains. Some cleaners can disinfect the bowl from bacteria and viruses, while others don’t.


Choosing a green or organic toilet bowl cleaner that is versatile and can be used on different surfaces is better. They should be suitable for both porcelain and ceramic toilets. 

You can also use these bathroom cleaners on showers, sinks, bathtubs, and tiles. Many of them are designed specifically for ToTo toilets or 2 lesser toilets.

How Do You Get Rid of Bacteria in Your Toilet?

How Do You Get Rid of Bacteria in Your Toilet

Toilets can become breeding grounds for bacteria, so keeping the toilet bowl clean and free of germs is essential. Several eco toilet cleaners clean your toilet and eliminate bacteria and viruses.

But check the label to make sure the cleaner is designed to disinfect. Some cleaners are only made to remove dirt and grime. You should clean under the toilet bowl rim of the toilet seat regularly.

How Do You Remove Yellow Stains from a Toilet Bowl?

A few cleaning products can be used to remove yellow stains from toilet bowls. While bleach can remove stains, it is harmful to health. 

Vinegar is also an effective natural cleaner for removing stains. You can also use natural cleaning products for toilets, specifically designed to get rid of yellow stains.

What Toilet Bowl Cleaner is Safe for RV Toilets?

What Toilet Bowl Cleaner is Safe for RV Toilets

Non-toxic cleaners are the ultimate choice for cleaning your RV toilet. They are made from biodegradable and are safe for RV septic systems. They won’t leave behind any toxic fumes or residue, and they are safe to use around children and pets.

Does Vinegar Damage Toilet Bowls?

While vinegar is acidic, it is not strong enough to eat through porcelain. It can help to remove stains from your toilet bowl. You should use vinegar carefully.

If your toilet bowl has cracks or chips, do not use vinegar, as the acidity can cause further damage. When used properly, vinegar is a safe and effective method to clean your toilet bowl.

What Should You not Mix with Vinegar to Clean the Toilet Bowl?

There are two things that you should not mix with vinegar when cleaning the toilet. Vinegar and bleach should never be mixed when cleaning toilet bowls. The combination of these two chemicals can release harmful chlorine gas.

You should not mix vinegar with rubbing alcohol or hydrogen peroxide. These combinations can also create harmful chemicals.

Is It Okay To Put Vinegar and Baking Soda in a Toilet Tank?

Is It Okay To Put Vinegar and Baking Soda in a Toilet Tank

You can add baking soda and vinegar to your toilet tank. 

Baking soda is an effective cleaning agent because it’s abrasive and can break up grime. Vinegar is also useful for cleaning toilets because it’s acidic and can dissolve mineral deposits.

Dumping them into your toilet tank will only do you a little good. Instead, you must create a mixture of baking soda and vinegar and apply it directly to the bowl. Let it sit for several hours before scrubbing it with a toilet brush.

This combination can help to clean your toilet and keep it Fresh. Baking soda breaks down any build-up on your toilet tank walls, while vinegar disinfects and deodorizes.

Can You Leave Baking Soda and Vinegar in the Toilet Overnight?

You can safely leave these natural cleaning agents in your toilet overnight. This cleaning method can be used to remove stains, build-up, and odors from your toilet bowl. It can help to prevent future build-up by creating a barrier that stops dirt and grime from clinging to the sides of the bowl.

Combine equal parts baking soda and vinegar in a bowl. Pour the mixture into your toilet bowl and allow it to sit overnight. In the morning, flush the toilet to rinse away the mixture. You may notice that your toilet looks cleaner and brighter after using this method.

Can You Use Dawn and Vinegar to Clean Toilets?

Can You Use Dawn and Vinegar to Clean Toilets

You may wonder if Dawn and vinegar will work for a deep cleaning of your toilet bowl. The answer is yes! This combination can help remove stubborn stains and grime, leaving your toilet sparkling clean.

Dawn is a type of dish soap, and it’s known for being effective at cutting through grease and grime. Vinegar, on the other hand, is acidic and can help to break down tough deposits. So when you combine the two, you get a powerful cleaning solution.

To use Dawn and vinegar to clean your toilet, add a few squirts of Dawn into the bowl and then follow with a cup of vinegar. After letting the mixture sit for a few minutes, use a toilet brush to scrub it. You may need to repeat the process if there are tough stains or deposits.

How Do You Clean a Toilet Without Toxic Chemicals?

There are several ways to clean your toilet without using toxic chemicals. One option is to use a natural cleaning solution like vinegar and water. 

Another option is to use a non-toxic cleaner specifically designed for toilets. You can also try making your cleaner with ingredients like baking soda, lemon juice, and essential oils.

How Much Non-toxic Toilet Bowl Cleaner to Use?

The answer will depend on the size and type of toilet bowl you have. Most standard toilets require about 1/4 cup of cleaner. Be sure to follow the manufacturer’s instructions for the best results.

If you have a larger or deeper bowl, you may need to use a bit cleaner. You’re better off using too little cleaner than too much. If the bowl is not getting clean enough, you can always add a bit cleaner next time.

You now know almost everything about cleaning toilets with natural cleaning products. Get your toilet bowl sparkling clean without harsh chemicals by choosing the best non toxic toilet bowl cleaner from our list.

Better Life Natural Toilet Bowl Cleaner, Tea Tree & Peppermint Scent, 24 Fl Oz (Pack of 2)
  • Plant-Based Cleaning Agents: Made with ingredients that are gentle on the planet, you can feel good…
  • Powerful Clean, Naturally: Our Toilet Bowl Cleaner combines plant-based power and peace of mind,…
  • Throne-Tidying!: Give those gross toilet stains the brush off! Simply squirt the gel under the rim…
Best Non Toxic Toilet Bowl Cleaner: Top 5 Safe Picks in 2024

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